Class: Study (Study)

A particular biological hypothesis, which you are planning to test in various ways, using various techniques, which could be experimental.

URI: mife:Study

 classDiagram
    class Study
    click Study href "../Study/"
      Study : description

      Study : end_date

      Study : id

      Study : observation_unit_id





        Study --> "1..*" ObservationUnit : observation_unit_id
        click ObservationUnit href "../ObservationUnit/"



      Study : start_date

      Study : target_metabolite

      Study : title

Slots

Name	Cardinality and Range	Description	Inheritance
id	1 String	unique study identifier	direct
observation_unit_id	1..* ObservationUnit	unique identifier of the related study (multiple observationUnits can be part...	direct
title	1 String	title of the cultivation/fermentation (bioreactor, well)	direct
description	1 String	description of the purpose of the fermentation run	direct
start_date	0..1 Date	date that the fermentation run was initiated	direct
end_date	0..1 Date	date that the fermentation run ended	direct
target_metabolite	0..1 String	The specific compound or metabolite that is the desired outcome of the fermen...	direct

Identifier and Mapping Information

Schema Source

• from schema: https://ontology.ibisba.eu/mife/

Mappings

Mapping Type	Mapped Value
self	mife:Study
native	mife:Study

LinkML Source

Direct

name: Study
description: A particular biological hypothesis, which you are planning to test in
  various ways, using various techniques, which could be experimental.
title: Study
from_schema: https://ontology.ibisba.eu/mife/
slots:
- id
- observation_unit_id
- title
- description
- start_date
- end_date
- target_metabolite
class_uri: mife:Study

Induced

name: Study
description: A particular biological hypothesis, which you are planning to test in
  various ways, using various techniques, which could be experimental.
title: Study
from_schema: https://ontology.ibisba.eu/mife/
attributes:
  id:
    name: id
    description: unique study identifier
    examples:
    - value: WUR_PRO_000-000-001_INV_000-000-001_STU_000-000-001
    from_schema: https://ontology.ibisba.eu/mife/
    rank: 1000
    slot_uri: schema:identifier
    alias: id
    owner: Study
    domain_of:
    - Investigation
    - Study
    range: string
    required: true
    multivalued: false
  observation_unit_id:
    name: observation_unit_id
    description: unique identifier of the related study (multiple observationUnits
      can be part of the same study)
    examples:
    - value: FR46_Well_A4
    - value: FR28_Bioreactor_slot_7
    from_schema: https://ontology.ibisba.eu/mife/
    rank: 1000
    slot_uri: jermontology:hasPart
    alias: observation_unit_id
    owner: Study
    domain_of:
    - Study
    range: ObservationUnit
    required: true
    multivalued: true
  title:
    name: title
    description: title of the cultivation/fermentation (bioreactor, well)
    examples:
    - value: 12h Bioreactor run of PBAD in PET28A under 0.05% Arabinose
    from_schema: https://ontology.ibisba.eu/mife/
    rank: 1000
    slot_uri: schema:title
    alias: title
    owner: Study
    domain_of:
    - Assay
    - Investigation
    - Study
    - ObservationUnit
    range: string
    required: true
    multivalued: false
  description:
    name: description
    description: description of the purpose of the fermentation run
    examples:
    - value: A 12h Bioreactor run using PBAD in PET28A with a concentration of 0.05%
        Arabinose
    from_schema: https://ontology.ibisba.eu/mife/
    rank: 1000
    slot_uri: schema:description
    alias: description
    owner: Study
    domain_of:
    - Assay
    - Investigation
    - Study
    - ObservationUnit
    range: string
    required: true
    multivalued: false
  start_date:
    name: start_date
    description: date that the fermentation run was initiated
    examples:
    - value: 12-01-2023
    from_schema: https://ontology.ibisba.eu/mife/
    rank: 1000
    slot_uri: schema:startDate
    alias: start_date
    owner: Study
    domain_of:
    - Assay
    - Investigation
    - Study
    - ObservationUnit
    range: date
    required: false
    multivalued: false
  end_date:
    name: end_date
    description: date that the fermentation run ended
    examples:
    - value: 13-01-2023
    from_schema: https://ontology.ibisba.eu/mife/
    rank: 1000
    slot_uri: schema:endDate
    alias: end_date
    owner: Study
    domain_of:
    - Assay
    - Investigation
    - Study
    - ObservationUnit
    range: date
    required: false
    multivalued: false
  target_metabolite:
    name: target_metabolite
    description: The specific compound or metabolite that is the desired outcome of
      the fermentation process.
    examples:
    - value: recombinant insulin
    - value: streptokinase
    - value: EPO
    - value: nanobody
    from_schema: https://ontology.ibisba.eu/mife/
    rank: 1000
    slot_uri: mife:hasTargetMetabolite
    alias: target_metabolite
    owner: Study
    domain_of:
    - Study
    - ObservationUnit
    range: string
    required: false
    multivalued: false
class_uri: mife:Study